BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039D06LP1|AL430692
(933 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig638 1622 0.0
>3x_Contig638
Length = 2044
Score = 1622 bits (818), Expect = 0.0
Identities = 839/846 (99%)
Strand = Plus / Plus
Query: 88 actgccactctgaaattaatctatcgattttattcaacactagtattggtttcaacttct 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 actgccactctgaaattaatctatcgattttattcaacactagtattggtttcaacttct 97
Query: 148 caatccagcattgacgtaagacagtgaccgtttgggaacacacaccttccactacatcta 207
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 98 caatccagcattgacgtaagacattttttttttgggaacacacaccttccactacatcta 157
Query: 208 ccaaaacaacagcaccatcacacaaacgcgatgcagcactgacttcacttgaaaaatcaa 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ccaaaacaacagcaccatcacacaaacgcgatgcagcactgacttcacttgaaaaatcaa 217
Query: 268 tgtgacctggagagtcgattaaattaatcaaatgttcgttcaccagtggttcatctgaac 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tgtgacctggagagtcgattaaattaatcaaatgttcgttcaccagtggttcatctgaac 277
Query: 328 tttcttgcttgtgcagtactctgaaatataaagaaatggcacttgattccatggtaatac 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tttcttgcttgtgcagtactctgaaatataaagaaatggcacttgattccatggtaatac 337
Query: 388 ctcttagctgttcatcaggtcgtgagtttaggtatctaactctccctgctagtttctgag 447
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 ctcttagctgttcatcaggtcgtgagtctaggtatctaactctccctgctagtttctgag 397
Query: 448 atatgatgccgttagatgctaaaagggagtctgacaacgatgtcttaccatgatcaacat 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atatgatgccgttagatgctaaaagggagtctgacaacgatgtcttaccatgatcaacat 457
Query: 508 gtgctaaaatgcaaatatttctaatgcatgaagggtcggcctgtagccgttttgatgttt 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gtgctaaaatgcaaatatttctaatgcatgaagggtcggcctgtagccgttttgatgttt 517
Query: 568 ctggacctgcgcgagacatggtgcaattctttcaattcgagtttcaatgcttcagggctt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctggacctgcgcgagacatggtgcaattctttcaattcgagtttcaatgcttcagggctt 577
Query: 628 gaagtcctgtcgaaagatctgtgctaatctcaatgatgttggtaaaacctcttgctaacc 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gaagtcctgtcgaaagatctgtgctaatctcaatgatgttggtaaaacctcttgctaacc 637
Query: 688 ttttctattttctggattttttcaacagagatagatgttcataagggaacgaaaaatatc 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttttctattttctggattttttcaacagagatagatgttcataagggaacgaaaaatatc 697
Query: 748 taactgacaaagaaagttgtgaagtttgatgagatgaggtggctgttgtatagcgtccat 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 taactgacaaagaaagttgtgaagtttgatgagatgaggtggctgttgtatagcgtccat 757
Query: 808 tattgtgtccaaacaaccacgccataaatacacctatactaagataaatccatatgtcaa 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tattgtgtccaaacaaccacgccataaatacacctatactaagataaatccatatgtcaa 817
Query: 868 aaccgaagaacgatttgaaatgtccgcagtgtcaaagcaatttgcagagatgtttgattc 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 aaccgaagaacgatttgaaatgtccgcagtgtcaaagcaatttgcagagatgtttgattc 877
Query: 928 aacaga 933
||||||
Sbjct: 878 aacaga 883
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7705
Number of Sequences: 1807
Number of extensions: 7705
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)